Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919484.1_cds_XP_016468688.1_61298
CDS Infomation

[gene=LOC107791187] [db_xref=GeneID:107791187] [protein=pectinesterase 2.1-like] [protein_id=XP_016468688.1] [location=join(63447..64428,64976..65167,65277..65636,65819..65964)] [gbkey=CDS]
Sequence

ATGGCTACTCCTTACCAACCTCTGTTACCAGAGACACCAAAACAAAATCCCATAATAAGC
TGCAAGATCCTCACTTTTGTCATGACGTTCGTTGTTGCTCTCTTCTCAGTTGTTTTTCTT
GTTGCTCCTTATCAGTTTGAGGTTAAGCATTCTAATCTATCATCTTTACCTGGTCCACAA
CTATGTGAGGCTGCACAAGATTCCCAACTCTGCCTCAGTTATGTCTCTGAGCTAGTATCC
AATGGAATTGTTACATCCGATTCAGATGGACTTACTGTTCTGCAAAAATTCCTAGTAAAA
TATGTCCATCACATGAACAGTGCAATTCCAGTGGTTCACAAGATCAGAAACCAGATCAAT
GACATTAGTCACAAAGGAGCTTTAGCAGACTGTCTTGAGCTCCTTGACCTGTCAATTGAG
TTAGTGACTGACTCAATTGCAGCACTTGGTAAATCAAGAAGCCGTTTGGCACATGCCAAT
GCACAAATCTGGCTAAGTGGGATGCTTACTAACCACGTCACATGTTTAGATGGACTTAAT
TCCCTAAGTAACACAACTTCAATTGGAACGATTCTTGAAGAGTTGATCTCAAGAGCCAAA
ACAGCTTTGGCAATTCTTGCTTCTGTCACAACCCCAAATGAGGAAGTTTTCACGCCGCTT
TCGGGGAGAATGCCATCATGGGTAAATTCAAGAGACAGGAAGCTATTGGAGAGTTCAGCC
AAGGAAATTAAAGCTAATGCAGTGGTAGCACAAGATGGATCAGGGGATTATCAAACACTT
ACTGAAGCAGTTGCTGCAGCACCAGATAAGAGCAAGACTCGGTACGTGATCTATGTCAAG
AAGGGAATTTACAAAGAGAATGTGGAGGTGACTAAGAAGAAAATGAACTTGATGATTGTT
GGTGATGGCATGAATTCTACCATTATCACTGGTAGCCTTAATGTTGTGGATGGATCAACC
ACCTTCCGCTCTGCCACTCTTGCTGCAGTTGGCCAAGGATTTATACTACAAGACATCTGT
ATACAAAATACAGCAGGACCAGAGAAACACCAAGCAGTGGCACTTCGAGTGGGAGCTGAT
ATGTCTGTCATAAATCGTTGTCGTATTGATGCTTATCAAGATACCCTTTACGCACATTCT
CTAAGGCAATTCTATAGAGACTGCTACGTAACAGGTACTGTCGACTTCATATTTGGTAAT
GCAGCCGTTGTATTCCAGAAATGCCAACTTGTACCTAGAAAACCTGGTAAAAACCAGAAA
AACATGGTGACTGCACAAGGCCGAACAGATCCAAATCAGGCCACGGGAACTTCTATTCAA
TTCTGTGACATAATAGCAAGTCCAGACCTTGAACCAGTCAAGAGTGAATACAAAACATAT
CTTGGTAGGCCATGGAAGGAATATTCAAGAACGGTAGTCATGGAATCATACCTAGGTGAT
CTCATAGATCCAGCTGGTTGGTCTGAGTGGAGTGGAGATTTTGCCTTGAAGACATTATAC
TATGGGGAGTACATGAACAATGGACCTGGTGCAGGTACTAGCAAGAGGGTGACGTGGCCC
GGTTATCATGTCATAACTGATGCTGCTGAGGCTAGGCCGTTTACGGTGGCTGAGCTGATT
CAAGGCGGCTCGTGGTTGAGTTCAACTGGCGTGACTTTTGTTGAAGGATTGGATGAGTAG

Peptide Sequence

PEP ID

XP_016468688.1
PEP Infomation

PREDICTED: pectinesterase 2.1-like [Nicotiana tabacum]
Sequence

MATPYQPLLPETPKQNPIISCKILTFVMTFVVALFSVVFLVAPYQFEVKHSNLSSLPGPQ
LCEAAQDSQLCLSYVSELVSNGIVTSDSDGLTVLQKFLVKYVHHMNSAIPVVHKIRNQIN
DISHKGALADCLELLDLSIELVTDSIAALGKSRSRLAHANAQIWLSGMLTNHVTCLDGLN
SLSNTTSIGTILEELISRAKTALAILASVTTPNEEVFTPLSGRMPSWVNSRDRKLLESSA
KEIKANAVVAQDGSGDYQTLTEAVAAAPDKSKTRYVIYVKKGIYKENVEVTKKKMNLMIV
GDGMNSTIITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPEKHQAVALRVGAD
MSVINRCRIDAYQDTLYAHSLRQFYRDCYVTGTVDFIFGNAAVVFQKCQLVPRKPGKNQK
NMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVKSEYKTYLGRPWKEYSRTVVMESYLGD
LIDPAGWSEWSGDFALKTLYYGEYMNNGPGAGTSKRVTWPGYHVITDAAEARPFTVAELI
QGGSWLSSTGVTFVEGLDE

Transcript Sequence

Gene sequence data has not been registered.